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Tema Fridman
Telephone: (865) 241-9802 |
Keywords:
Modeling, algorithm, protein structure, kinetics, dynamics, mass spectrometry
Research Area:
Algorithm development, modeling of physical processes, protein structure prediction, molecular kinetics, molecular dynamics, molecular structure, mass spectrometry: database search algorithms, de novo and hybrid methods.
Description of Research:
Selected Publications:
- Gorin A., Day R.M., Arnold N.D., and Fridman T. (2006) "De Novo algorithms significantly outperform database search in coverage of normal proteins", Proceedings of 54th ASMS Conference on Mass Spectrometry, p. 107, Seattle, Washington, May 28 - June 1, 2006
- Gorin A., Day R.M., Fridman T., and Arnold N.D. (2006) "Estimating informational content of tandm mass-spectrometry data", Protein Science, v 15, Suppl 1, p. 149
- Day, R.M., Gorin, A., and Fridman, T. (2006) "De Novo Approach for Finding Post Translational Modifications", Experimental Biology 2006 Late-Breaking Abstracts, San Francisco, CA, April 1-5, 2006
- Tema Fridman, Vladimir Protopopescu, Greg Hurst, Andrei Borziak and Andrey G orin, "Optimal construction of theoretical spectra for MS/MS spectra identificat ion", OMICS 2005, Vol.9, No.4, p.380-390
- Tema Fridman, Vladimir Protopopescu, Greg Hurst, Andrei Borziak and Andrey G orin, "Generating theoretical spectra for peptide identification", METMBS'05 conference proceedings, Las Vegas June 20-23, 2005, p.180-189
- Tema Fridman, Jane Razumovskaya, Nathan Verberkmoes, Greg Hurst, Vladimir Protopopescu and Ying Xu, "The probability distribution for a random match between an experimental - theoretical spectral pair in tandem mass spectrometry", JBCB 2005, Vol.3, No.2, p.455-476